By Eftychia Lekka and Vassilis Virvilis The latest release of Biovista Vizit (May 2025) brings the integration of the MATISSE pocket binding similarity algorithm by SoftMining. MATISSE is a dynamic binding pocket analysis tool that uses short molecular dynamics (MD) simulations to capture the flexible nature of protein active sites. It offers detailed geometric, topological, … Read More
By V. Virvilis and E. Lekka The latest release of Biovista Vizit (March 2025) brings the integration of Human Phenotype Ontology (HPO) annotations into the Vizit Knowledge Graph. This is the 3rd corpus integration alongside with MEDLINE after AOP and PDB. The integration allows for additional links and evidence from HPO, with higher priority since … Read More
By V. Virvilis and E. Lekka The latest release of Biovista Vizit (January 2025) brings a few precious features especially relevant to our AOP users. The full changelog is also available. Note that Biovista Vizit is a free official 3rd party tool listed in the AOP-Wiki. The highlight of this release is the separation of … Read More
Proud to see that our effort is acknowledged in the very interesting upcoming book: OBO Semantic Engineer Training. The contribution was exemplified as best practice in the “How to be an Open Science Engineer – maximising impact for a better world” chapter. The work was made under the auspice of CIAO project and was part … Read More
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