Selected publications that cite Biovista Vizit

  • The FAIR AOP roadmap for 2025: Advancing findability, accessibility, interoperability, and re-usability of adverse outcome pathways. Holly M. Mortensen, Maciej Gromelski, Ginnie Hench, Marvin Martens, Clemens Wittwehr, Saurav Kumar, Vikas Kumar, Karine Audouze, Vassilis Virvilis, Penny Nymark, Michelle Angrish, Iseult Lynch, Stephen Edwards, Barbara Magagna, Marcin W. Wojewodzic. Computational Toxicology, Volume 35, 2025, 100368, ISSN 2468-1113, https://doi.org/10.1016/.comtox.2025.100368
  • Nurettin Yarar, Marvin Martens, Torbjørn Rognes, Jan Lavender, Hubert Dirven, Karine Audouze, Marcin W Wojewodzic, AOP-networkFinder—a versatile tool for the reconstruction and visualization of Adverse Outcome Pathway networks from AOP-Wiki, Bioinformatics Advances, Volume 5, Issue 1, 2025, vbaf007, https://doi.org/10.1093/bioadv/vbaf007
  • AOP Net: An AI-Enhanced Software Platform for the Visualization and Analysis of Complex Toxicological Pathways. Abhik Seal. bioRxiv 2025.08.25.672239; doi: https://doi.org/10.1101/2025.08.25.672239
  • Mamta Behl, Agnes Karmaus, Mohan Rao, Thomas Lane, Joshua Harris, Clifford Sachs, Alexandre Borrel, Oluwakemi Oyetade, Aswani Unnikrishnan, Jonathan Hamm, Helena T Hogberg, De-risking seizure liability: integrating adverse outcome pathways (AOPs), new approach methodologies (NAMs), and in silico approaches while highlighting knowledge gaps, Toxicological Sciences, Volume 207, Issue 2, October 2025, Pages 306–319 DOI: 10.1093/toxsci/kfaf109
  • Wang X, Zhang S, Jin D, Luo J, Shi Y, Zhang Y, Wu L, Song Y, Su D, Pan Z, Chen H, Cao M, Yang C, Yu W, Tian J. μ-opioid receptor agonist facilitates circulating tumor cell formation in bladder cancer via the MOR/AKT/Slug pathway: a comprehensive study including randomized controlled trial. Cancer Commun (Lond). 2023 Mar;43(3):365-386. doi: 10.1002/cac2.12408. Epub 2023 Feb 5. PMID: 36739595; PMCID: PMC10009666.
  • Ma, Y., Yang, C., Liang, Q. et al. Direct Current Electric Field Coordinates the Migration of BV2 Microglia via ERK/GSK3β/Cofilin Signaling Pathway. Mol Neurobiol 59, 3665–3677 (2022). DOI: 10.1007/s12035-022-02815-5
  • Circadian Rhythms Regulate the NLRP3 Inflammasome in Macrophages DOI: 10.25419/rcsi.23216126.v1
  • Building an Adverse Outcome Pathway network for COVID-19 DOI: 10.3389/fsysb.2024.1384481
  • Revealing an adverse outcome pathway network for reproductive toxicity induced by atrazine, via oxidative stress 20240321 DOI: 10.1016/j.comtox.2024.100317
  • Activation of kappa opioid receptor (KOR) inhibits estrogen receptor (ER)-positive breast cancer through the KOR-ER-XBP1 pathway 20230302 DOI: 10.1016/j.biopha.2023.115462
  • In vivo assessment of the toxic impact of exposure to magnetic iron oxide nanoparticles (IONPs) using Drosophila melanogaster 20240327 PMID: 38492762
  • Adverse outcome pathway network approach to identify endocrine disruptor-induced reproductive toxicity Current Opinion in Toxicology (AOP-Wiki table with 3rd party tools) 20230312 DOI: 10.1016/j.cotox.2023.100391
  • Critical points for optimizing long-term culture and neural differentiation capacity of rodent and human neural stem cells to facilitate translation into clinical settings Experimental Neurology (graph based on Biovista Vizit) 20230224 DOI: 10.1016/j.expneurol.2023.114353
  • Industrializing AI/ML during the end-to-end drug discovery process (table with AI tools) 20230201 DOI: j.sbi.2023.102528
  • Differential expression of aqueous humor microRNAs in central retinal vein occlusion and its association with matrix metalloproteinases: a pilot study (2022) PMCID: PMC9525721
  • Chemoradiotherapy Alters Protein Expression in Glioblastoma Multiforme (2020) PMCID: PMC7541983
  • Arch Toxicol: Molecular basis of mood and cognitive adverse events elucidated via a combination of pharmacovigilance data mining and functional enrichment analysis PMCID: PMC7395038
  • Food Nutr Res: Evaluation of Colocasia esculenta Schott in anti-cancerous properties with proximity extension assays PMCID: PMC8634378
  • Cells: Neurogenic and Neuroprotective Potential of Stem/Stromal Cells Derived from Adipose Tissue PMCID: PMC8231154
  • Molecular Therapy: “Increased microglial exosomal miR-124-3p alleviates neurodegeneration and improves cognitive outcome after repetitive mild traumatic brain injury” DOI: 10.1016/j.ymthe.2019.11.017
  • Master Thesis: Brazil: Identificação das proteínas interagentes de Yes-Associated Protein (YAP), um efetor da via Hippo, em células epiteliais mamárias expostas à matriz extracelular rica em laminina Download: PDF
  • Master Thesis: ΣΥΣΤΗΜΙΚΗ ΑΝΑΛΥΣΗ ΒΙΟΛΟΓΙΚΩΝ ΜΟΝΟΠΑΤΙΩΝ ΤΩΝ ΑΣΘΕΝΕΙΩΝΠΟΥ ΣΧΕΤΙΖΟΝΤΑΙ ΜΕ ΤΟΝ ΚΥΤΤΑΡΟΣΚΕΛΕΤΟ Download:PDF
  • Master Thesis: Santanter: ERIKA CONCEPCIÓN BADILLO TRIANA: VARIANTES DE UN GEN CANDIDATO CON EXPRESIÓN DIFERENCIAL Y SU ASOCIACIÓN CON CARDIOMIOPATÍA CHAGÁSICA CRÓNICA Download: PDF